Data Category | Data | Organism | Source | PubMed | Link |
---|---|---|---|---|---|
Genome Assembly |
Genome Assembly | Acromyrmex echinatior | GCF_000204515.1_Aech_3.9 | Nygaard et al. - PubMed 21719571 | NCBI FTP |
Ancistrocerus nigricornis | GCA_916049575.1_iyAncNigr1.1 | Not published. See DTOL Open Data Release | NCBI FTP | ||
Andrena dorsata | GCA_929108735.1_iyAndDors1.1 | Not published. See DTOL Open Data Release | NCBI FTP | ||
Andrena haemorrhoa | GCA_910592295.1_iyAndHaem1.1 | Not published. See DTOL Open Data Release | NCBI FTP | ||
Anoplius nigerrimus | GCA_914767735.1_iyAnoNige1.1 | Falk et al. - Wellcome Open Research DOI | NCBI FTP | ||
Aphidius gifuensis | GCF_014905175.1_ASM1490517v1 | Li et al. - PubMed 33314728 | NCBI FTP | ||
Apis cerana | GCF_001442555.1_ACSNU-2.0 | Wang et al. - PubMed 32292419 | NCBI FTP | ||
Apis dorsata | GCF_000469605.1_Apis_dorsata_1.3 | Fouks et al. - PubMed 33947700 | NCBI FTP | ||
Apis florea | GCF_000184785.3_Aflo_1.1 | Fouks et al. - PubMed 33947700 | NCBI FTP | ||
Apis laboriosa | GCF_014066325.1_ASM1406632v1 | Lin et al. - PubMed 34599331 | NCBI FTP | ||
Apis mellifera | GCF_003254395.2_Amel_HAv3.1 | Wallberg et al. - PubMed 30961563 | NCBI FTP | ||
Athalia rosae | GCF_917208135.1_iyAthRosa1.1 | Not published. See DTOL Open Data Release | NCBI FTP | ||
Atta cephalotes | GCF_000143395.1_Attacep1.0 | Suen et al. - PubMed 21347285 | NCBI FTP | ||
Atta colombica | GCF_001594045.1_Acol1.0 | Nygaard et al. - PubMed 27436133 | NCBI FTP | ||
Belonocnema kinseyi | GCF_010883055.1_B_treatae_v1 | Not published. See DTOL Open Data Release | NCBI FTP | ||
Bombus bifarius | GCF_011952205.1_Bbif_JDL3187 | Heraghty et al. - PubMed 32586847 | NCBI FTP | ||
Bombus breviceps | GCA_014825925.1_ASM1482592v1 | Sun et al. - PubMed 32946576 | NCBI FTP | ||
Bombus campestris | GCA_905333015.2_iyBomCamp1.2 | Not published. See DTOL Open Data Release | NCBI FTP | ||
Bombus confusus | GCA_014737475.1_ASM1473747v1 | Sun et al. - PubMed 32946576 | NCBI FTP | ||
Bombus consobrinus | GCA_014737455.1_ASM1473745v1 | Sun et al. - PubMed 32946576 | NCBI FTP | ||
Bombus cullumanus | GCA_014737535.1_ASM1473753v1 | Sun et al. - PubMed 32946576 | NCBI FTP | ||
Bombus difficillimus | GCA_014737525.1_ASM1473752v1 | Sun et al. - PubMed 32946576 | NCBI FTP | ||
Bombus haemorrhoidalis | GCA_014825975.1_ASM1482597v1 | Sun et al. - PubMed 32946576 | NCBI FTP | ||
Bombus hortorum | GCA_905332935.1_iyBomHort1.1 | Crowley et al. - PubMed 34778570 | NCBI FTP | ||
Bombus hypnorum | GCA_911387925.1_iyBomHypn1.1 | Not published. See DTOL Open Data Release | NCBI FTP | ||
Bombus impatiens | GCF_000188095.3_BIMP_2.2 | Sadd et al. - PubMed 25908251 | NCBI FTP | ||
Bombus opulentus | GCA_014737405.1_ASM1473740v1 | Sun et al. - PubMed 32946576 | NCBI FTP | ||
Bombus pascuorum | GCA_905332965.1_iyBomPasc1.1 | Not published. See DTOL Open Data Release | NCBI FTP | ||
Bombus picipes | GCA_014737485.1_ASM1473748v1 | Sun et al. - PubMed 32946576 | NCBI FTP | ||
Bombus polaris | GCA_014737335.1_ASM1473733v1 | Sun et al. - PubMed 32946576 | NCBI FTP | ||
Bombus pratorum | GCA_930367275.1_iyBomPrat1.1 | Not published. See DTOL Open Data Release | NCBI FTP | ||
Bombus pyrosoma | GCF_014825855.1_ASM1482585v1 | Sun et al. - PubMed 32946576 | NCBI FTP | ||
Bombus sibiricus | GCA_014737505.1_ASM1473750v1 | Sun et al. - PubMed 32946576 | NCBI FTP | ||
Bombus skorikovi | GCA_014737355.1_ASM1473735v1 | Sun et al. - PubMed 32946576 | NCBI FTP | ||
Bombus soroeensis | GCA_014737365.1_ASM1473736v1 | Sun et al. - PubMed 32946576 | NCBI FTP | ||
Bombus superbus | GCA_014737385.1_ASM1473738v1 | Sun et al. - PubMed 32946576 | NCBI FTP | ||
Bombus sylvestris | GCA_911622165.1_iyBomSyle1.1 | Not published. See DTOL Open Data Release | NCBI FTP | ||
Bombus terrestris | GCF_910591885.1_iyBomTerr1.2 | Not published. See DTOL Open Data Release | NCBI FTP | ||
Bombus turneri | GCA_014825825.1_ASM1482582v1 | Sun et al. - PubMed 32946576 | NCBI FTP | ||
Bombus vancouverensis nearcticus | GCF_011952275.1_Bvanc_JDL1245 | Heraghty et al. - PubMed 32586847 | NCBI FTP | ||
Bombus vosnesenskii | GCF_011952255.1_Bvos_JDL3184-5_v1.1 | Heraghty et al. - PubMed 32586847 | NCBI FTP | ||
Bombus waltoni | GCA_014737395.1_ASM1473739v1 | Sun et al. - PubMed 32946576 | NCBI FTP | ||
Camponotus floridanus | GCF_003227725.1_Cflo_v7.5 | Bonasio et al. - PubMed 20798317 | NCBI FTP | ||
Cardiocondyla obscurior | Cobs_1.4 | Schrader et al. - PubMed 25510865 | HGD Genome Fasta Download | ||
Cephus cinctus | GCF_000341935.2_Ccin1v2 | Robertson et al. - PubMed 30335145 | NCBI FTP | ||
Ceratina calcarata | GCF_001652005.1_ASM165200v1 | Rehan et al. - PubMed 27048475 | NCBI FTP | ||
Ceratosolen solmsi marchali | GCF_000503995.1_CerSol_1.0 | Xiao et al. - PubMed 24359812 | NCBI FTP | ||
Cerceris rybyensis | GCA_910591515.1_iyCerRyby1.1 | Crowley et al. - PubMed 35425864 | NCBI FTP | ||
Chelonus insularis | GCF_013357705.1_ASM1335770v1 | Not published. See i5K data usage | NCBI FTP | ||
Colletes gigas | GCF_013123115.1_ASM1312311v1 | Zhou et al. - PubMed 32386319 | NCBI FTP | ||
Copidosoma floridanum | GCF_000648655.2_Cflo_2.0 | Thomas et al. - PubMed 31969194 | NCBI FTP | ||
Cotesia glomerata | GCF_020080835.1_MPM_Cglom_v2.3 | Pinto et al. - PubMed 34043785 | NCBI FTP | ||
Cyphomyrmex costatus | GCF_001594065.1_Ccosl1.0 | Nygaard et al. - PubMed 27436133 | NCBI FTP | ||
Diachasma alloeum | GCF_001412515.2_Dall2.0 | Tvedte et al. - PubMed 31553440 | NCBI FTP | ||
Dinoponera quadriceps | GCF_001313825.1_ASM131382v1 | Patalano et al. - PubMed 26483466 | NCBI FTP | ||
Diprion similis | GCF_021155765.1_iyDipSimi1.1 | Childers et al. - PubMed 34357286 | NCBI FTP | ||
Dolichovespula media | GCA_911387685.1_iyDolMedi1.1 | Not published. See DTOL Open Data Release | NCBI FTP | ||
Dolichovespula saxonica | GCA_911387935.1_iyDolSaxo1.1 | Not published. See DTOL Open Data Release | NCBI FTP | ||
Drosophila melanogaster | GCF_000001215.4_Release_6_plus_ISO1_MT | Solares et al. - PubMed 30018084 | NCBI FTP | ||
Dufourea novaeangliae | GCF_001272555.1_ASM127255v1 | Kapheim et al. - PubMed 25977371 | NCBI FTP | ||
Ectemnius continuus | GCA_910591665.1_iyEctCont1.1 | Not published. See DTOL Open Data Release | NCBI FTP | ||
Ectemnius lituratus | GCA_910593735.2_iyEctLitu1.2 | Not published. See DTOL Open Data Release | NCBI FTP | ||
Eufriesea mexicana | GCF_001483705.1_ASM148370v1 | Kapheim et al. - PubMed 25977371 | NCBI FTP | ||
Fopius arisanus | GCF_000806365.1_ASM80636v1 | Geib et al. - PubMed 28584080 | NCBI FTP | ||
Formica exsecta | GCF_003651465.1_ASM365146v1 | Dhaygude et al. - PubMed 30991952 | NCBI FTP | ||
Frieseomelitta varia | GCF_011392965.1_Fvar_1.2 | de Paula Freitas et al. - PubMed 32493270 | NCBI FTP | ||
Habropoda laboriosa | GCF_001263275.1_ASM126327v1 | Kapheim et al. - PubMed 25977371 | NCBI FTP | ||
Harpegnathos saltator | GCF_003227715.2_Hsal_v8.6 | Bonasio et al. - PubMed 20798317 | NCBI FTP | ||
Ichneumon xanthorius | GCA_917499995.1_iyIchXant1.1 | University of Oxford and Wytham Woods Genome Acquisition Lab et al. - PubMed 35419493 | NCBI FTP | ||
Lasioglossum albipes | Lalb_v2 | Kocher et al. - PubMed 24359881 | HGD Genome Fasta Download | ||
Lasioglossum lativentre | GCA_916610255.1_iyLasLatv2.1 | Falk at al. - Wellcome Open Research DOI | NCBI FTP | ||
Lasioglossum morio | GCA_916610235.2_iyLasMori1.2 | Not published. See DTOL Open Data Release | NCBI FTP | ||
Leptopilina heterotoma | GCF_015476425.1_ASM1547642v1 | Wey et al. - PubMed 31676506 | NCBI FTP | ||
Linepithema humile | GCF_000217595.1_Lhum_UMD_V04 | Smith et al. - PubMed 21282631 | NCBI FTP | ||
Macropis europaea | GCA_916610135.2_iyMacEuro1.2 | Falk et al. - Wellcome Open Research DOI | NCBI FTP | ||
Megachile rotundata | GCF_000220905.1_MROT_1.0 | Kapheim et al. - PubMed 25977371 | NCBI FTP | ||
Megalopta genalis | GCF_011865705.1_USU_MGEN_1.2 | Kapheim et al. - Pubmed 32471944 | NCBI FTP | ||
Melipona quadrifasciata | GCA_001276565.1_ASM127656v1 | Kapheim et al. - PubMed 25977371 | NCBI FTP | ||
Microplitis demolitor | GCF_000572035.2_Mdem2 | Burke et al. - PubMed 30018085 | NCBI FTP | ||
Monomorium pharaonis | GCF_013373865.1_ASM1337386v2 | Gao et al. - PubMed 33319913 | NCBI FTP | ||
Nasonia vitripennis | GCF_009193385.2_Nvit_psr_1.1 | Benetta et al. - PubMed 32284986 | NCBI FTP | ||
Neodiprion fabricii | GCF_021155785.1_iyNeoFabr1.1 | Childers et al. - PubMed 34357286 | NCBI FTP | ||
Neodiprion lecontei | GCF_021901455.1_iyNeoLeco1.1 | Linnen et al. - PubMed 29496749 | NCBI FTP | ||
Neodiprion pinetum | GCF_021155775.1_iyNeoPine1.1 | Childers et al. - PubMed 34357286 | NCBI FTP | ||
Neodiprion virginianus | GCF_021901495.1_iyNeoVirg1.1 | Childers et al. - PubMed 34357286 | NCBI FTP | ||
Nomada fabriciana | GCA_907165295.1_iyNomFabr1.1 | Not published. See DTOL Open Data Release | NCBI FTP | ||
Nomia melanderi | GCF_003710045.2_USU_Nmel_1.3 | Kapheim et al. - PubMed 30642875 | NCBI FTP | ||
Nylanderia fulva | GCF_005281655.2_TAMU_Nfulva_1.1 | Not published. See i5K data usage | NCBI FTP | ||
Nysson spinosus | GCA_910591585.1_iyNysSpin1.1 | Not published. See DTOL Open Data Release | NCBI FTP | ||
Odontomachus brunneus | GCF_010583005.1_Obru_v1 | Not published. See i5K data usage | NCBI FTP | ||
Ooceraea biroi | GCF_003672135.1_Obir_v5.4 | Oxley PR et al. - PubMed 24508170 | NCBI FTP | ||
Orussus abietinus | GCF_000612105.2_Oabi_2.0 | Oeyen et al. - PubMed 32442304 | NCBI FTP | ||
Osmia bicornis bicornis | GCF_907164935.1_iOsmBic2.1 | Not published. See DTOL Open Data Release | NCBI FTP | ||
Osmia lignaria | GCF_012274295.1_USDA_OLig_1.0 | Melicher 2020 - Ag Data Commons DOI | NCBI FTP | ||
Pogonomyrmex barbatus | GCF_000187915.1_Pbar_UMD_V03 | Smith et al. - PubMed 21282651 | NCBI FTP | ||
Polistes canadensis | GCF_001313835.1_ASM131383v1 | Patalano et al. - PubMed 26483466 | NCBI FTP | ||
Polistes dominula | GCF_001465965.1_Pdom_r1.2 | Standage et al. - PubMed 26859767 | NCBI FTP | ||
Polistes fuscatus | GCF_010416935.1_CU_Pfus_HIC | Miller et al. - PubMed 31980529 | NCBI FTP | ||
Pseudomyrmex gracilis | GCF_002006095.1_ASM200609v1 | Rubin et al. - PubMed 27557866 | NCBI FTP | ||
Seladonia tumulorum | GCA_913789895.3_iySelTumu1.3 | Falk et al. - Wellcome Open Research DOI | NCBI FTP | ||
Solenopsis invicta | GCF_016802725.1_UNIL_Sinv_3.0 | Wurm et al. - PubMed 21282665 | NCBI FTP | ||
Sphecodes monilicornis | GCA_913789915.3_iySphMoni1.3 | Falk et al. - Wellcome Open Research DOI | NCBI FTP | ||
Temnothorax curvispinosus | GCF_003070985.1_ASM307098v1 | Not published. See HGD data usage | NCBI FTP | ||
Trachymyrmex cornetzi | GCF_001594075.2_Tcor1.1 | Nygaard et al. - PubMed 27436133 | NCBI FTP | ||
Trachymyrmex septentrionalis | GCF_001594115.1_Tsep1.0 | Nygaard et al. - PubMed 27436133 | NCBI FTP | ||
Trachymyrmex zeteki | GCF_001594055.1_Tzet1.0 | Nygaard et al. - PubMed 27436133 | NCBI FTP | ||
Trichogramma pretiosum | GCF_000599845.2_Tpre_2.0 | Lindsey et al. - PubMed 29776407 | NCBI FTP | ||
Venturia canescens | GCF_019457755.1_ASM1945775v1 | Not published. See HGD data usage | NCBI FTP | ||
Vespa crabro | GCF_910589235.1_iyVesCrab1.2 | Crowley et al. - Wellcome Open Research DOI | NCBI FTP | ||
Vespa mandarinia | GCF_014083535.2_V.mandarinia_Nanaimo_p1.0 | Childers et al. - Ag Data Commons DOI | NCBI FTP | ||
Vespa velutina | GCF_912470025.1_iVesVel2.1 | Not published. See DTOL Open Data Release | NCBI FTP | ||
Vespula germanica | GCA_905340365.1_iyVesGerm1.1 | Crowley et al. - Wellcome Open Research DOI | NCBI FTP | ||
Vespula pensylvanica | GCF_014466175.1_ASM1446617v1 | Harrop et al. - PubMed 32859687 | NCBI FTP | ||
Vespula vulgaris | GCA_905475345.1_iyVesVulg1.1 | Crowley et al. - Wellcome Open Research DOI | NCBI FTP | ||
Vollenhovia emeryi | GCF_000949405.1_V.emery_V1.0 | Smith et al. - PubMed 26226984 | NCBI FTP | ||
Wasmannia auropunctata | GCF_000956235.1_wasmannia.A_1.0 | Not published. See HGD data usage | NCBI FTP | ||
Genes |
NCBI RefSeq Annotation | Acromyrmex echinatior | GCF_000204515.1 Aech_3.9 AR100 13 Jan 2015 | Li et al. - PubMed 33270901 | NCBI FTP |
Aphidius gifuensis | GCF_014905175.1 ASM1490517v1 AR100 6 Oct 2021 | NCBI FTP | |||
Apis cerana | GCF_001442555.1 ACSNU 2.0 AR101 17 Apr 2019 | NCBI FTP | |||
Apis dorsata | GCF_000469605.1 Apis_dorsata_1.3 AR101 5 Nov 2019 | NCBI FTP | |||
Apis florea | GCF_000184785.3 Aflo_1.1 AR102 23 Dec 2019 | NCBI FTP | |||
Apis laboriosa | GCF_014066325.1 ASM1406632v1 AR100 28 Sep 2021 | NCBI FTP | |||
Apis mellifera | GCF_003254395.2 Amel_HAv3.1 AR104 19 Sep 2018 | NCBI FTP | |||
Athalia rosae | GCF_917208135.1 iyAthRosa1.1 AR103 12 Jun 2022 | NCBI FTP | |||
Atta cephalotes | GCF_000143395.1 Attacep1.0 AR100 2 Apr 2015 | NCBI FTP | |||
Atta colombica | GCF_001594045.1 Acol1.0 AR100 19 Sep 2016 | NCBI FTP | |||
Belonocnema kinseyi | GCF_010883055.1 B_treatae_v1 AR100.20220217 23 Feb 2022 | NCBI FTP | |||
Bombus bifarius | GCF_011952205.1 Bbif_JDL3187 AR100 16 Apr 2020 | NCBI FTP | |||
Bombus impatiens | GCF_000188095.3 BIMP_2.2 AR103 10 Apr 2020 | NCBI FTP | |||
Bombus pyrosoma | GCF_014825855.1 ASM1482585v1 AR100 21 Sep 2021 | NCBI FTP | |||
Bombus terrestris | GCF_910591885.1 iyBomTerr1.2 AR103 26 May 2022 | NCBI FTP | |||
Bombus vancouverensis nearcticus | GCF_011952275.1 Bvanc_JDL1245 AR100 12 Apr 2020 | NCBI FTP | |||
Bombus vosnesenskii | GCF_011952255.1 Bvos_JDL3184 5_v1.1 AR100 16 Apr 2020 | NCBI FTP | |||
Camponotus floridanus | GCF_003227725.1 Cflo_v7.5 AR102 3 Jul 2018 | NCBI FTP | |||
Cephus cinctus | GCF_000341935.1 Ccin1v2 AR101 16 May 2018 | NCBI FTP | |||
Ceratina calcarata | GCF_001652005.1 ASM165200v1 AR101 17 Oct 2018 | NCBI FTP | |||
Ceratosolen solmsi marchali | GCF_000503995.1 CerSol_1.0 AR100 9 Mar 2015 | NCBI FTP | |||
Chelonus insularis | GCF_013357705.1 ASM1335770v1 AR100 23 Jun 2020 | NCBI FTP | |||
Colletes gigas | GCF_013123115.1 ASM1312311v1 AR100 2 Sep 2021 | NCBI FTP | |||
Copidosoma floridanum | GCF_000648655.2 Cflo_2.0 AR101 26 Dec 2017 | NCBI FTP | |||
Cotesia glomerata | GCF_020080835.1 MPM_Cglom_v2.3 AR100 25 Oct 2021 | NCBI FTP | |||
Cyphomyrmex costatus | GCF_001594065.1 Ccosl1.0 AR100 27 Sep 2016 | NCBI FTP | |||
Diachasma alloeum | GCF_001412515.2 Dall2.0 AR101 23 May 2019 | NCBI FTP | |||
Dinoponera quadriceps | GCF_001313825.1 ASM131382v1 AR100 12 Nov 2015 | NCBI FTP | |||
Diprion similis | GCF_021155765.1 iyDipSimi1.1 AR100 23 Feb 2022 | NCBI FTP | |||
Drosophila melanogaster | GCF_000001215.4 Release_6_plus_ISO1_MT 12 Feb 2020 | NCBI FTP | |||
Dufourea novaeangliae | GCF_001272555.1 ASM127255v1 AR100 9 Feb 2016 | NCBI FTP | |||
Eufriesea mexicana | GCF_001483705.1 ASM148370v1 AR100 26 Aug 2016 | NCBI FTP | |||
Fopius arisanus | GCF_000806365.1 ASM80636v1 AR100 10 Feb 2015 | NCBI FTP | |||
Formica exsecta | GCF_003651465.1 ASM365146v1 AR100 4 Jul 2019 | NCBI FTP | |||
Frieseomelitta varia | GCF_011392965.1 Fvar_1.2 AR100 15 Sep 2021 | NCBI FTP | |||
Habropoda laboriosa | GCF_001263275.1 ASM126327v1 AR100 26 Aug 2016 | NCBI FTP | |||
Harpegnathos saltator | GCF_003227715.1 Hsal_v8.6 AR102 26 Jun 2018 | NCBI FTP | |||
Leptopilina heterotoma | GCF_015476425.1 ASM1547642v1 AR100 10 Sep 2021 | NCBI FTP | |||
Linepithema humile | GCF_000217595.1 Lhum_UMD_V04 AR100 27 Apr 2015 | NCBI FTP | |||
Megachile rotundata | GCF_000220905.1 MROT_1.0 AR101 7 Apr 2015 | NCBI FTP | |||
Megalopta genalis | GCF_011865705.1 USU_MGEN_1.2 AR100 17 Apr 2020 | NCBI FTP | |||
Microplitis demolitor | GCF_000572035.2 Mdem2 AR101 19 Oct 2015 | NCBI FTP | |||
Monomorium pharaonis | GCF_013373865.1 ASM1337386v2 AR102 30 Sep 2020 | NCBI FTP | |||
Nasonia vitripennis | GCF_009193385.2 Nvit_psr_1.1 AR104 29 Feb 2020 | NCBI FTP | |||
Neodiprion fabricii | GCF_021155785.1 iyNeoFabr1.1 AR100 8 Feb 2022 | NCBI FTP | |||
Neodiprion lecontei | GCF_021901455.1 iyNeoLeco1.1 AR101 17 Feb 2022 | NCBI FTP | |||
Neodiprion pinetum | GCF_021155775.1 iyNeoPine1.1 AR100 11 Feb 2022 | NCBI FTP | |||
Neodiprion virginianus | GCF_021901495.1 iyNeoVirg1.1 AR100 17 Feb 2022 | NCBI FTP | |||
Nomia melanderi | GCF_003710045.2 USU_Nmel_1.3 29 Jun 2022 | NCBI FTP | |||
Nylanderia fulva | GCF_005281655.2 TAMU_Nfulva_1.1 2 May 2022 | NCBI FTP | |||
Odontomachus brunneus | GCF_010583005.1 Obru_v1 AR100 14 Mar 2020 | NCBI FTP | |||
Ooceraea biroi | GCF_003672135.1 Obir_v5.4 AR100 7 Nov 2018 | NCBI FTP | |||
Orussus abietinus | GCF_000612105.2 Oabi_2.0 AR101 2 Jan 2018 | NCBI FTP | |||
Osmia bicornis bicornis | GCF_907164935.1 iOsmBic2.1 AR101 1 Feb 2022 | NCBI FTP | |||
Osmia lignaria | GCF_012274295.1 USDA_OLig_1.0 AR100 13 May 2020 | NCBI FTP | |||
Pogonomyrmex barbatus | GCF_000187915.1 Pbar_UMD_V03 AR101 7 Jun 2018 | NCBI FTP | |||
Polistes canadensis | GCF_001313835.1 ASM131383v1 AR100 24 Nov 2015 | NCBI FTP | |||
Polistes dominula | GCF_001465965.1 Pdom_r1.2 AR100 6 Jan 2016 | NCBI FTP | |||
Polistes fuscatus | GCF_010416935.1 CU_Pfus_HIC AR100 10 Sep 2021 | NCBI FTP | |||
Pseudomyrmex gracilis | GCF_002006095.1 ASM200609v1 AR100 8 Mar 2017 | NCBI FTP | |||
Solenopsis invicta | GCF_016802725.1 UNIL_Sinv_3.0 AR104 12 Feb 2021 | NCBI FTP | |||
Temnothorax curvispinosus | GCF_003070985.1 ASM307098v1 AR100 7 May 2018 | NCBI FTP | |||
Trachymyrmex cornetzi | GCF_001594075.2 Tcor1.1 20 May 2022 | NCBI FTP | |||
Trachymyrmex septentrionalis | GCF_001594115.1 Tsep1.0 AR100 23 Sep 2016 | NCBI FTP | |||
Trachymyrmex zeteki | GCF_001594055.1 Tzet1.0 AR100 22 Sep 2016 | NCBI FTP | |||
Trichogramma pretiosum | GCF_000599845.2 Tpre_2.0 AR101 5 Jan 2018 | NCBI FTP | |||
Venturia canescens | GCF_019457755.1 ASM1945775v1 AR100 3 Sep 2021 | NCBI FTP | |||
Vespa crabro | GCF_910589235.1 iyVesCrab1.2 AR100 1 Mar 2022 | NCBI FTP | |||
Vespa mandarinia | GCF_014083535.2 V.mandarinia_Nanaimo_p1.0 17 Apr 2021 | NCBI FTP | |||
Vespa velutina | GCF_912470025.1 iVesVel2.1 AR100 6 Apr 2022 | NCBI FTP | |||
Vespula pensylvanica | GCF_014466175.1 ASM1446617v1 AR100 22 Sep 2021 | NCBI FTP | |||
Vollenhovia emeryi | GCF_000949405.1 V.emery_V1.0 AR100 30 Mar 2015 | NCBI FTP | |||
Wasmannia auropunctata | GCF_000956235.1 wasmannia.A_1.0 AR100 24 Mar 2015 | NCBI FTP | |||
Ensembl Rapid Release Annotation | Ancistrocerus nigricornis | Ensembl Rapid Release GCA_916049575.1 geneset 2021_11 | Cunningham et al. - PubMed 34791404 | Ensembl FTP | |
Andrena dorsata | Ensembl Rapid Release GCA_929108735.1 geneset 2022_03 | Ensembl FTP | |||
Andrena haemorrhoa | Ensembl Rapid Release GCA_910592295.1 geneset 2021_11 | Ensembl FTP | |||
Anoplius nigerrimus | Ensembl Rapid Release GCA_914767735.1 geneset 2022_02 | Ensembl FTP | |||
Aphidius gifuensis | Ensembl Rapid Release GCA_014905175.1 geneset 2021_12 | Ensembl FTP | |||
Athalia rosae | Ensembl Rapid Release GCA_917208135.1 geneset 2021_11 | Ensembl FTP | |||
Bombus bifarius | Ensembl Rapid Release GCA_011952205.1 geneset 2021_11 | Ensembl FTP | |||
Bombus breviceps | Ensembl Rapid Release GCA_014825925.1 geneset 2021_11 | Ensembl FTP | |||
Bombus campestris | Ensembl Rapid Release GCA_905333015.2 geneset 2022_03 | Ensembl FTP | |||
Bombus confusus | Ensembl Rapid Release GCA_014737475.1 geneset 2021_11 | Ensembl FTP | |||
Bombus consobrinus | Ensembl Rapid Release GCA_014737455.1 geneset 2021_11 | Ensembl FTP | |||
Bombus cullumanus | Ensembl Rapid Release GCA_014737535.1 geneset 2021_11 | Ensembl FTP | |||
Bombus difficillimus | Ensembl Rapid Release GCA_014737525.1 geneset 2021_11 | Ensembl FTP | |||
Bombus haemorrhoidalis | Ensembl Rapid Release GCA_014825975.1 geneset 2021_11 | Ensembl FTP | |||
Bombus hortorum | Ensembl Rapid Release GCA_905332935.1 geneset 2021_11 | Ensembl FTP | |||
Bombus hypnorum | Ensembl Rapid Release GCA_911387925.1 geneset 2021_11 | Ensembl FTP | |||
Bombus opulentus | Ensembl Rapid Release GCA_014737405.1 geneset 2021_11 | Ensembl FTP | |||
Bombus pascuorum | Ensembl Rapid Release GCA_905332965.1 geneset 2021_11 | Ensembl FTP | |||
Bombus picipes | Ensembl Rapid Release GCA_014737485.1 geneset 2021_11 | Ensembl FTP | |||
Bombus polaris | Ensembl Rapid Release GCA_014737335.1 geneset 2021_11 | Ensembl FTP | |||
Bombus pratorum | Ensembl Rapid Release GCA_930367275.1 geneset 2022_03 | Ensembl FTP | |||
Bombus pyrosoma | Ensembl Rapid Release GCA_014825855.1 geneset 2021_11 | Ensembl FTP | |||
Bombus sibiricus | Ensembl Rapid Release GCA_014737505.1 geneset 2021_11 | Ensembl FTP | |||
Bombus skorikovi | Ensembl Rapid Release GCA_014737355.1 geneset 2021_11 | Ensembl FTP | |||
Bombus soroeensis | Ensembl Rapid Release GCA_014737365.1 geneset 2021_11 | Ensembl FTP | |||
Bombus superbus | Ensembl Rapid Release GCA_014737385.1 geneset 2021_11 | Ensembl FTP | |||
Bombus sylvestris | Ensembl Rapid Release GCA_911622165.1 geneset 2021_11 | Ensembl FTP | |||
Bombus terrestris | Ensembl Rapid Release GCA_910591885.2 geneset 2022_03 | Ensembl FTP | |||
Bombus turneri | Ensembl Rapid Release GCA_014825825.1 geneset 2021_11 | Ensembl FTP | |||
Bombus vancouverensis nearcticus | Ensembl Rapid Release GCA_011952275.1 geneset 2021_11 | Ensembl FTP | |||
Bombus waltoni | Ensembl Rapid Release GCA_014737395.1 geneset 2021_11 | Ensembl FTP | |||
Cerceris rybyensis | Ensembl Rapid Release GCA_910591515.1 geneset 2021_11 | Ensembl FTP | |||
Colletes gigas | Ensembl Rapid Release GCA_013123115.1 geneset 2021_11 | Ensembl FTP | |||
Dolichovespula media | Ensembl Rapid Release GCA_911387685.1 geneset 2021_11 | Ensembl FTP | |||
Dolichovespula saxonica | Ensembl Rapid Release GCA_911387935.1 geneset 2022_02 | Ensembl FTP | |||
Ectemnius continuus | Ensembl Rapid Release GCA_910591665.1 geneset 2021_11 | Ensembl FTP | |||
Ectemnius lituratus | Ensembl Rapid Release GCA_910593735.2 geneset 2022_03 | Ensembl FTP | |||
Ichneumon xanthorius | Ensembl Rapid Release GCA_917499995.1 geneset 2021_11 | Ensembl FTP | |||
Lasioglossum lativentre | Ensembl Rapid Release GCA_916610255.1 geneset 2022_02 | Ensembl FTP | |||
Lasioglossum morio | Ensembl Rapid Release GCA_916610235.2 geneset 2022_03 | Ensembl FTP | |||
Macropis europaea | Ensembl Rapid Release GCA_916610135.1 geneset 2021_11 | Ensembl FTP | |||
Nomada fabriciana | Ensembl Rapid Release GCA_907165295.1 geneset 2021_11 | Ensembl FTP | |||
Nysson spinosus | Ensembl Rapid Release GCA_910591585.1 geneset 2021_11 | Ensembl FTP | |||
Osmia bicornis bicornis | Ensembl Rapid Release GCA_907164935.1 geneset 2021_11 | Ensembl FTP | |||
Seladonia tumulorum | Ensembl Rapid Release GCA_913789895.3 geneset 2022_03 | Ensembl FTP | |||
Sphecodes monilicornis | Ensembl Rapid Release GCA_913789915.3 geneset 2022_03 | Ensembl FTP | |||
Vespa crabro | Ensembl Rapid Release GCA_910589235.2 geneset 2022_03 | Ensembl FTP | |||
Vespa velutina | Ensembl Rapid Release GCA_912470025.1 geneset 2021_11 | Ensembl FTP | |||
Vespula germanica | Ensembl Rapid Release GCA_905340365.1 geneset 2021_11 | Ensembl FTP | |||
Vespula vulgaris | Ensembl Rapid Release GCA_905475345.1 geneset 2021_11 | Ensembl FTP | |||
GenBank | Melipona quadrifasciata | GCA_001276565.1_ASM127656v1 10 Sep 2015 | Sayers et al. - PubMed 30365038 | NCBI FTP | |
Consortium Official Gene Set | Acromyrmex echinatior | aech_OGSv3.8 | Nygaard et al. - PubMed 21719571 | HGD OGS GFF3 Download | |
Apis mellifera | amel_OGSv3.2 | Elsik et al. - PubMed 24479613 | |||
Atta cephalotes | acep_OGSv1.2 | Suen et al. - PubMed 21347285 | |||
Bombus impatiens | bimp_OGSv1.0 | Sadd et al. - PubMed 25908251 | |||
Camponotus floridanus | cflo_OGSv3.3 | Bonasio et al. - PubMed 20798317 | |||
Cardiocondyla obscurior | cobs_OGSv1.4 | Schrader et al. - PubMed 25510865 | |||
Dufourea novaeangliae | Dufourea_novaeangliae_v1.1 | Kapheim et al. - PubMed 25977371 | |||
Eufriesea mexicana | Eufriesea_mexicana_v1.1 | Kapheim et al. - PubMed 25977371 | |||
Habropoda laboriosa | Habropoda_laboriosa_v1.2 | Kapheim et al. - PubMed 25977371 | |||
Harpegnathos saltator | hsal_OGSv3.3 | Bonasio et al. - PubMed 20798317 | |||
Lasioglossum albipes | lalb_OGSv5.42 | Kocher et al. - PubMed 24359881 | |||
Linepithema humile | lhum_OGSv1.2 | Smith et al. - PubMed 21282631 | |||
Megachile rotundata | Megachile_rotundata_v1.1 | Kapheim et al. - PubMed 25977371 | |||
Melipona quadrifasciata | Melipona_quadrifasciata_v1.1 | Kapheim et al. - PubMed 25977371 | |||
Nasonia vitripennis | nvit_OGSv1.2 | Werren JH et al. - PubMed 20075255 | |||
Nvit_EviGene | Werren JH et al. - PubMed 20075255 | ||||
Ooceraea biroi | armyant.OGS.V1.8.6 | Oxley PR et al. - PubMed 24508170 | |||
Pogonomyrmex barbatus | pbar_OGSv1.2 | Smith et al. - PubMed 21282651 | |||
Solenopsis invicta | sinv_OGSv2.2.3 | Wurm et al. - PubMed 21282665 | |||
Homology |
Orthologue Relationships from HGD-Ortho | All species | HGD-Ortho from HGD; 12 Oct 2022 | Walsh el al. - PubMed 34747465 | HGD Ortholog Download |
Reciprocal Best Hits to Drosophila melanogaster | Drosophila-RBH from HGD; 12 Oct 2022 | Walsh el al. - PubMed 34747465 | |||
Orthologue Relationships from OrthoDB | Acromyrmex echinatior Apis mellifera Athalia rosae Atta colombica Bombus impatiens Camponotus floridanus Cardiocondyla obscurior Cephus cinctus Ceratina calcarata Ceratosolen solmsi marchali Copidosoma floridanum Cyphomyrmex costatus Diachasma alloeum Dinoponera quadriceps Drosophila melanogaster Dufourea novaeangliae Eufriesea mexicana Fopius arisanus Habropoda laboriosa Harpegnathos saltator Lasioglossum albipes Linepithema humile Megachile rotundata Melipona quadrifasciata Microplitis demolitor Monomorium pharaonis Nasonia vitripennis Neodiprion lecontei Orussus abietinus Pogonomyrmex barbatus Polistes canadensis Pseudomyrmex gracilis Solenopsis invicta Trachymyrmex septentrionalis Trichogramma pretiosum Vollenhovia emeryi Wasmannia auropunctata |
OrthoDB release v11; October 2022 | Zdobnov et al. - PubMed 33196836 | OrthoDB | |
Proteins |
Protein Annotations from UniProt (numbers of proteins are shown in parentheses) | Acromyrmex echinatior (13972) Ancistrocerus nigricornis (2) Andrena dorsata (35) Andrena haemorrhoa (39) Anoplius nigerrimus (29) Aphidius gifuensis (11629) Apis cerana (5827) Apis dorsata (276) Apis florea (168) Apis laboriosa (46) Apis mellifera (20904) Athalia rosae (40) Atta cephalotes (10689) Atta colombica (14195) Bombus bifarius (19394) Bombus breviceps (24) Bombus campestris (24) Bombus confusus (9) Bombus consobrinus (32) Bombus cullumanus (3) Bombus difficillimus (9) Bombus haemorrhoidalis (13) Bombus hortorum (56) Bombus hypnorum (23) Bombus impatiens (19234) Bombus opulentus (6) Bombus pascuorum (117) Bombus picipes (8) Bombus polaris (20) Bombus pratorum (50) Bombus pyrosoma (20) Bombus sibiricus (19) Bombus skorikovi (5) Bombus soroeensis (13) Bombus superbus (2) Bombus sylvestris (33) Bombus terrestris (17507) Bombus turneri (5) Bombus vancouverensis nearcticus (7) Bombus vosnesenskii (19385) Bombus waltoni (22) Camponotus floridanus (14806) Cephus cinctus (310) Ceratina calcarata (34) Ceratosolen solmsi marchali (8) Cerceris rybyensis (12) Chelonus insularis (21) Colletes gigas (20) Copidosoma floridanum (169) Cotesia glomerata (26) Cyphomyrmex costatus (15724) Diachasma alloeum (443) Dinoponera quadriceps (17674) Diprion similis (22) Dolichovespula media (10) Dolichovespula saxonica (12) Drosophila melanogaster (42761) Dufourea novaeangliae (11369) Ectemnius continuus (17) Ectemnius lituratus (4) Eufriesea mexicana (7071) Fopius arisanus (13360) Formica exsecta (14) Frieseomelitta varia (11118) Habropoda laboriosa (12787) Harpegnathos saltator (15052) Lasioglossum albipes (23) Lasioglossum lativentre (26) Lasioglossum morio (111) Leptopilina heterotoma (21) Linepithema humile (94) Macropis europaea (20) Megachile rotundata (47) Megalopta genalis (11) Melipona quadrifasciata (14288) Microplitis demolitor (15) Monomorium pharaonis (36) Nasonia vitripennis (25102) Neodiprion lecontei (14473) Neodiprion pinetum (10) Nomada fabriciana (22) Nylanderia fulva (447) Nysson spinosus (5) Odontomachus brunneus (8) Ooceraea biroi (25795) Orussus abietinus (14) Osmia bicornis bicornis (5) Osmia lignaria (32) Pogonomyrmex barbatus (16255) Polistes canadensis (10) Polistes dominula (80) Polistes fuscatus (62) Pseudomyrmex gracilis (24) Seladonia tumulorum (49) Solenopsis invicta (14410) Sphecodes monilicornis (32) Temnothorax curvispinosus (21945) Trachymyrmex cornetzi (18757) Trachymyrmex septentrionalis (15227) Trachymyrmex zeteki (14333) Trichogramma pretiosum (12) Venturia canescens (83) Vespa crabro (36) Vespa mandarinia (56) Vespa velutina (41) Vespula germanica (17251) Vespula pensylvanica (18575) Vespula vulgaris (15565) Vollenhovia emeryi (126) Wasmannia auropunctata (136) |
UniProt Release 2022_03; 3 Aug 2022 | UniProt Consortium - PubMed 33237286 | UniProt FTP |
Protein family and domain assignments to proteins from InterPro | See UniProt Protein List | InterPro Release 90.0; 4 Aug 2022 | Blum et al. - PubMed 33156333 | InterPro FTP | |
Gene Ontology |
Gene Ontology Annotations from UniProt | See UniProt Protein List | UniProt Release 2022_03; 3 Aug 2022 | UniProt Consortium - PubMed 33237286 | UniProt FTP |
Gene Ontology Annotations from HGD-GO-Annotation | All species | HGD-GO-Annotation from HGD; 26 Oct 2022 | Walsh el al. - PubMed 34747465 | HGD GO Annotation Download | |
Gene Ontology Annotations from FlyBase | Drosophila melanogaster | FlyBase release FB2022_05; 13 Sep 2022 | Larkin et al. - PubMed 33219682 | FlyBase Download | |
Pathways |
Pathway Information from KEGG | Acromyrmex echinatior Aphidius gifuensis Apis laboriosa Apis mellifera Atta cephalotes Bombus bifarius Bombus impatiens Bombus pyrosoma Bombus terrestris Bombus vancouverensis nearcticus Bombus vosnesenskii Camponotus floridanus Cephus cinctus Ceratina calcarata Ceratosolen solmsi marchali Colletes gigas Cotesia glomerata Diachasma alloeum Dinoponera quadriceps Drosophila melanogaster Fopius arisanus Formica exsecta Harpegnathos saltator Leptopilina heterotoma Linepithema humile Megalopta genalis Microplitis demolitor Monomorium pharaonis Nasonia vitripennis Nomia melanderi Ooceraea biroi Osmia bicornis bicornis Pogonomyrmex barbatus Polistes canadensis Polistes fuscatus Pseudomyrmex gracilis Solenopsis invicta Trichogramma pretiosum Vespula pensylvanica Vollenhovia emeryi |
KEGG release 104.0; 1 Oct 2022 | Kanehisa et al. - PubMed 33125081 | KEGG Download |
Pathway information inferred through orthologues from curated human pathways | Drosophila melanogaster | Reactome version 80; 5 Apr 2022 | Gillespie et al. PubMed 34788843 | Reactome Download | |
Interactions |
Interactions from BioGRID | Apis mellifera | BioGRID version 4.4.213; 25 Aug 2022 | Oughtred et al. - PubMed: 33070389 | BioGRID Download |
Drosophila melanogaster | |||||
Interactions from IntAct | Drosophila melanogaster | IntAct Release 243; 13 Jul 2022 | Del Toro et al. - PubMed 34761267 | IntAct Download | |
Publications |
A mapping from genes to publications from NCBI | See NCBI RefSeq Gene list | NCBI PubMed | Sayers et al. - PubMed 33095870 | NCBI FTP |
A mapping from genes to publications from UniProt | See UniProt Protein List | UniProt Release 2022_03; 3 Aug 2022 | UniProt Consortium - PubMed 33237286 | UniProt FTP | |
Ontologies |
Evidence Ontology | Release date: 5 Aug 2022 | Nadendla et al. - PubMed 34986598 | ECO | |
Gene Ontology | Release date: 4 Dec 2022 | Gene Ontology Consortium - PubMed 33290552 | GO | ||
Hymenoptera Anatomy Ontology | Release date: 5 Mar 2021 | Yoder et al. - PubMed 21209921 | HAO | ||
PSI MI Ontology | Release date: 15 Apr 2021 | Orchard et al. - PubMed 20013380 | PSI-MI | ||
Sequence Ontology | Release date: 22 Nov 2021 | Eilbeck et al. - PubMed: 15892872 | SO |