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Data CategoryDataOrganismSourcePubMedLink

Genome Assembly

Genome Assembly Acromyrmex echinatior GCF_000204515.1_Aech_3.9 Nygaard et al. - PubMed 21719571 NCBI FTP
Ancistrocerus nigricornis GCA_916049575.1_iyAncNigr1.1 Not published. See DTOL Open Data Release NCBI FTP
Andrena dorsata GCA_929108735.1_iyAndDors1.1 Not published. See DTOL Open Data Release NCBI FTP
Andrena haemorrhoa GCA_910592295.1_iyAndHaem1.1 Not published. See DTOL Open Data Release NCBI FTP
Anoplius nigerrimus GCA_914767735.1_iyAnoNige1.1 Falk et al. - Wellcome Open Research DOI NCBI FTP
Aphidius gifuensis GCF_014905175.1_ASM1490517v1 Li et al. - PubMed 33314728 NCBI FTP
Apis cerana GCF_001442555.1_ACSNU-2.0 Wang et al. - PubMed 32292419 NCBI FTP
Apis dorsata GCF_000469605.1_Apis_dorsata_1.3 Fouks et al. - PubMed 33947700 NCBI FTP
Apis florea GCF_000184785.3_Aflo_1.1 Fouks et al. - PubMed 33947700 NCBI FTP
Apis laboriosa GCF_014066325.1_ASM1406632v1 Lin et al. - PubMed 34599331 NCBI FTP
Apis mellifera GCF_003254395.2_Amel_HAv3.1 Wallberg et al. - PubMed 30961563 NCBI FTP
Athalia rosae GCF_917208135.1_iyAthRosa1.1 Not published. See DTOL Open Data Release NCBI FTP
Atta cephalotes GCF_000143395.1_Attacep1.0 Suen et al. - PubMed 21347285 NCBI FTP
Atta colombica GCF_001594045.1_Acol1.0 Nygaard et al. - PubMed 27436133 NCBI FTP
Belonocnema kinseyi GCF_010883055.1_B_treatae_v1 Not published. See DTOL Open Data Release NCBI FTP
Bombus bifarius GCF_011952205.1_Bbif_JDL3187 Heraghty et al. - PubMed 32586847 NCBI FTP
Bombus breviceps GCA_014825925.1_ASM1482592v1 Sun et al. - PubMed 32946576 NCBI FTP
Bombus campestris GCA_905333015.2_iyBomCamp1.2 Not published. See DTOL Open Data Release NCBI FTP
Bombus confusus GCA_014737475.1_ASM1473747v1 Sun et al. - PubMed 32946576 NCBI FTP
Bombus consobrinus GCA_014737455.1_ASM1473745v1 Sun et al. - PubMed 32946576 NCBI FTP
Bombus cullumanus GCA_014737535.1_ASM1473753v1 Sun et al. - PubMed 32946576 NCBI FTP
Bombus difficillimus GCA_014737525.1_ASM1473752v1 Sun et al. - PubMed 32946576 NCBI FTP
Bombus haemorrhoidalis GCA_014825975.1_ASM1482597v1 Sun et al. - PubMed 32946576 NCBI FTP
Bombus hortorum GCA_905332935.1_iyBomHort1.1 Crowley et al. - PubMed 34778570 NCBI FTP
Bombus hypnorum GCA_911387925.1_iyBomHypn1.1 Not published. See DTOL Open Data Release NCBI FTP
Bombus impatiens GCF_000188095.3_BIMP_2.2 Sadd et al. - PubMed 25908251 NCBI FTP
Bombus opulentus GCA_014737405.1_ASM1473740v1 Sun et al. - PubMed 32946576 NCBI FTP
Bombus pascuorum GCA_905332965.1_iyBomPasc1.1 Not published. See DTOL Open Data Release NCBI FTP
Bombus picipes GCA_014737485.1_ASM1473748v1 Sun et al. - PubMed 32946576 NCBI FTP
Bombus polaris GCA_014737335.1_ASM1473733v1 Sun et al. - PubMed 32946576 NCBI FTP
Bombus pratorum GCA_930367275.1_iyBomPrat1.1 Not published. See DTOL Open Data Release NCBI FTP
Bombus pyrosoma GCF_014825855.1_ASM1482585v1 Sun et al. - PubMed 32946576 NCBI FTP
Bombus sibiricus GCA_014737505.1_ASM1473750v1 Sun et al. - PubMed 32946576 NCBI FTP
Bombus skorikovi GCA_014737355.1_ASM1473735v1 Sun et al. - PubMed 32946576 NCBI FTP
Bombus soroeensis GCA_014737365.1_ASM1473736v1 Sun et al. - PubMed 32946576 NCBI FTP
Bombus superbus GCA_014737385.1_ASM1473738v1 Sun et al. - PubMed 32946576 NCBI FTP
Bombus sylvestris GCA_911622165.1_iyBomSyle1.1 Not published. See DTOL Open Data Release NCBI FTP
Bombus terrestris GCF_910591885.1_iyBomTerr1.2 Not published. See DTOL Open Data Release NCBI FTP
Bombus turneri GCA_014825825.1_ASM1482582v1 Sun et al. - PubMed 32946576 NCBI FTP
Bombus vancouverensis nearcticus GCF_011952275.1_Bvanc_JDL1245 Heraghty et al. - PubMed 32586847 NCBI FTP
Bombus vosnesenskii GCF_011952255.1_Bvos_JDL3184-5_v1.1 Heraghty et al. - PubMed 32586847 NCBI FTP
Bombus waltoni GCA_014737395.1_ASM1473739v1 Sun et al. - PubMed 32946576 NCBI FTP
Camponotus floridanus GCF_003227725.1_Cflo_v7.5 Bonasio et al. - PubMed 20798317 NCBI FTP
Cardiocondyla obscurior Cobs_1.4 Schrader et al. - PubMed 25510865 HGD Genome Fasta Download
Cephus cinctus GCF_000341935.2_Ccin1v2 Robertson et al. - PubMed 30335145 NCBI FTP
Ceratina calcarata GCF_001652005.1_ASM165200v1 Rehan et al. - PubMed 27048475 NCBI FTP
Ceratosolen solmsi marchali GCF_000503995.1_CerSol_1.0 Xiao et al. - PubMed 24359812 NCBI FTP
Cerceris rybyensis GCA_910591515.1_iyCerRyby1.1 Crowley et al. - PubMed 35425864 NCBI FTP
Chelonus insularis GCF_013357705.1_ASM1335770v1 Not published. See i5K data usage NCBI FTP
Colletes gigas GCF_013123115.1_ASM1312311v1 Zhou et al. - PubMed 32386319 NCBI FTP
Copidosoma floridanum GCF_000648655.2_Cflo_2.0 Thomas et al. - PubMed 31969194 NCBI FTP
Cotesia glomerata GCF_020080835.1_MPM_Cglom_v2.3 Pinto et al. - PubMed 34043785 NCBI FTP
Cyphomyrmex costatus GCF_001594065.1_Ccosl1.0 Nygaard et al. - PubMed 27436133 NCBI FTP
Diachasma alloeum GCF_001412515.2_Dall2.0 Tvedte et al. - PubMed 31553440 NCBI FTP
Dinoponera quadriceps GCF_001313825.1_ASM131382v1 Patalano et al. - PubMed 26483466 NCBI FTP
Diprion similis GCF_021155765.1_iyDipSimi1.1 Childers et al. - PubMed 34357286 NCBI FTP
Dolichovespula media GCA_911387685.1_iyDolMedi1.1 Not published. See DTOL Open Data Release NCBI FTP
Dolichovespula saxonica GCA_911387935.1_iyDolSaxo1.1 Not published. See DTOL Open Data Release NCBI FTP
Drosophila melanogaster GCF_000001215.4_Release_6_plus_ISO1_MT Solares et al. - PubMed 30018084 NCBI FTP
Dufourea novaeangliae GCF_001272555.1_ASM127255v1 Kapheim et al. - PubMed 25977371 NCBI FTP
Ectemnius continuus GCA_910591665.1_iyEctCont1.1 Not published. See DTOL Open Data Release NCBI FTP
Ectemnius lituratus GCA_910593735.2_iyEctLitu1.2 Not published. See DTOL Open Data Release NCBI FTP
Eufriesea mexicana GCF_001483705.1_ASM148370v1 Kapheim et al. - PubMed 25977371 NCBI FTP
Fopius arisanus GCF_000806365.1_ASM80636v1 Geib et al. - PubMed 28584080 NCBI FTP
Formica exsecta GCF_003651465.1_ASM365146v1 Dhaygude et al. - PubMed 30991952 NCBI FTP
Frieseomelitta varia GCF_011392965.1_Fvar_1.2 de Paula Freitas et al. - PubMed 32493270 NCBI FTP
Habropoda laboriosa GCF_001263275.1_ASM126327v1 Kapheim et al. - PubMed 25977371 NCBI FTP
Harpegnathos saltator GCF_003227715.2_Hsal_v8.6 Bonasio et al. - PubMed 20798317 NCBI FTP
Ichneumon xanthorius GCA_917499995.1_iyIchXant1.1 University of Oxford and Wytham Woods Genome Acquisition Lab et al. - PubMed 35419493 NCBI FTP
Lasioglossum albipes Lalb_v2 Kocher et al. - PubMed 24359881 HGD Genome Fasta Download
Lasioglossum lativentre GCA_916610255.1_iyLasLatv2.1 Falk at al. - Wellcome Open Research DOI NCBI FTP
Lasioglossum morio GCA_916610235.2_iyLasMori1.2 Not published. See DTOL Open Data Release NCBI FTP
Leptopilina heterotoma GCF_015476425.1_ASM1547642v1 Wey et al. - PubMed 31676506 NCBI FTP
Linepithema humile GCF_000217595.1_Lhum_UMD_V04 Smith et al. - PubMed 21282631 NCBI FTP
Macropis europaea GCA_916610135.2_iyMacEuro1.2 Falk et al. - Wellcome Open Research DOI NCBI FTP
Megachile rotundata GCF_000220905.1_MROT_1.0 Kapheim et al. - PubMed 25977371 NCBI FTP
Megalopta genalis GCF_011865705.1_USU_MGEN_1.2 Kapheim et al. - Pubmed 32471944 NCBI FTP
Melipona quadrifasciata GCA_001276565.1_ASM127656v1 Kapheim et al. - PubMed 25977371 NCBI FTP
Microplitis demolitor GCF_000572035.2_Mdem2 Burke et al. - PubMed 30018085 NCBI FTP
Monomorium pharaonis GCF_013373865.1_ASM1337386v2 Gao et al. - PubMed 33319913 NCBI FTP
Nasonia vitripennis GCF_009193385.2_Nvit_psr_1.1 Benetta et al. - PubMed 32284986 NCBI FTP
Neodiprion fabricii GCF_021155785.1_iyNeoFabr1.1 Childers et al. - PubMed 34357286 NCBI FTP
Neodiprion lecontei GCF_021901455.1_iyNeoLeco1.1 Linnen et al. - PubMed 29496749 NCBI FTP
Neodiprion pinetum GCF_021155775.1_iyNeoPine1.1 Childers et al. - PubMed 34357286 NCBI FTP
Neodiprion virginianus GCF_021901495.1_iyNeoVirg1.1 Childers et al. - PubMed 34357286 NCBI FTP
Nomada fabriciana GCA_907165295.1_iyNomFabr1.1 Not published. See DTOL Open Data Release NCBI FTP
Nomia melanderi GCF_003710045.2_USU_Nmel_1.3 Kapheim et al. - PubMed 30642875 NCBI FTP
Nylanderia fulva GCF_005281655.2_TAMU_Nfulva_1.1 Not published. See i5K data usage NCBI FTP
Nysson spinosus GCA_910591585.1_iyNysSpin1.1 Not published. See DTOL Open Data Release NCBI FTP
Odontomachus brunneus GCF_010583005.1_Obru_v1 Not published. See i5K data usage NCBI FTP
Ooceraea biroi GCF_003672135.1_Obir_v5.4 Oxley PR et al. - PubMed 24508170 NCBI FTP
Orussus abietinus GCF_000612105.2_Oabi_2.0 Oeyen et al. - PubMed 32442304 NCBI FTP
Osmia bicornis bicornis GCF_907164935.1_iOsmBic2.1 Not published. See DTOL Open Data Release NCBI FTP
Osmia lignaria GCF_012274295.1_USDA_OLig_1.0 Melicher 2020 - Ag Data Commons DOI NCBI FTP
Pogonomyrmex barbatus GCF_000187915.1_Pbar_UMD_V03 Smith et al. - PubMed 21282651 NCBI FTP
Polistes canadensis GCF_001313835.1_ASM131383v1 Patalano et al. - PubMed 26483466 NCBI FTP
Polistes dominula GCF_001465965.1_Pdom_r1.2 Standage et al. - PubMed 26859767 NCBI FTP
Polistes fuscatus GCF_010416935.1_CU_Pfus_HIC Miller et al. - PubMed 31980529 NCBI FTP
Pseudomyrmex gracilis GCF_002006095.1_ASM200609v1 Rubin et al. - PubMed 27557866 NCBI FTP
Seladonia tumulorum GCA_913789895.3_iySelTumu1.3 Falk et al. - Wellcome Open Research DOI NCBI FTP
Solenopsis invicta GCF_016802725.1_UNIL_Sinv_3.0 Wurm et al. - PubMed 21282665 NCBI FTP
Sphecodes monilicornis GCA_913789915.3_iySphMoni1.3 Falk et al. - Wellcome Open Research DOI NCBI FTP
Temnothorax curvispinosus GCF_003070985.1_ASM307098v1 Not published. See HGD data usage NCBI FTP
Trachymyrmex cornetzi GCF_001594075.2_Tcor1.1 Nygaard et al. - PubMed 27436133 NCBI FTP
Trachymyrmex septentrionalis GCF_001594115.1_Tsep1.0 Nygaard et al. - PubMed 27436133 NCBI FTP
Trachymyrmex zeteki GCF_001594055.1_Tzet1.0 Nygaard et al. - PubMed 27436133 NCBI FTP
Trichogramma pretiosum GCF_000599845.2_Tpre_2.0 Lindsey et al. - PubMed 29776407 NCBI FTP
Venturia canescens GCF_019457755.1_ASM1945775v1 Not published. See HGD data usage NCBI FTP
Vespa crabro GCF_910589235.1_iyVesCrab1.2 Crowley et al. - Wellcome Open Research DOI NCBI FTP
Vespa mandarinia GCF_014083535.2_V.mandarinia_Nanaimo_p1.0 Childers et al. - Ag Data Commons DOI NCBI FTP
Vespa velutina GCF_912470025.1_iVesVel2.1 Not published. See DTOL Open Data Release NCBI FTP
Vespula germanica GCA_905340365.1_iyVesGerm1.1 Crowley et al. - Wellcome Open Research DOI NCBI FTP
Vespula pensylvanica GCF_014466175.1_ASM1446617v1 Harrop et al. - PubMed 32859687 NCBI FTP
Vespula vulgaris GCA_905475345.1_iyVesVulg1.1 Crowley et al. - Wellcome Open Research DOI NCBI FTP
Vollenhovia emeryi GCF_000949405.1_V.emery_V1.0 Smith et al. - PubMed 26226984 NCBI FTP
Wasmannia auropunctata GCF_000956235.1_wasmannia.A_1.0 Not published. See HGD data usage NCBI FTP

Genes

NCBI RefSeq Annotation Acromyrmex echinatior GCF_000204515.1 Aech_3.9 AR100 13 Jan 2015 Li et al. - PubMed 33270901 NCBI FTP
Aphidius gifuensis GCF_014905175.1 ASM1490517v1 AR100 6 Oct 2021 NCBI FTP
Apis cerana GCF_001442555.1 ACSNU 2.0 AR101 17 Apr 2019 NCBI FTP
Apis dorsata GCF_000469605.1 Apis_dorsata_1.3 AR101 5 Nov 2019 NCBI FTP
Apis florea GCF_000184785.3 Aflo_1.1 AR102 23 Dec 2019 NCBI FTP
Apis laboriosa GCF_014066325.1 ASM1406632v1 AR100 28 Sep 2021 NCBI FTP
Apis mellifera GCF_003254395.2 Amel_HAv3.1 AR104 19 Sep 2018 NCBI FTP
Athalia rosae GCF_917208135.1 iyAthRosa1.1 AR103 12 Jun 2022 NCBI FTP
Atta cephalotes GCF_000143395.1 Attacep1.0 AR100 2 Apr 2015 NCBI FTP
Atta colombica GCF_001594045.1 Acol1.0 AR100 19 Sep 2016 NCBI FTP
Belonocnema kinseyi GCF_010883055.1 B_treatae_v1 AR100.20220217 23 Feb 2022 NCBI FTP
Bombus bifarius GCF_011952205.1 Bbif_JDL3187 AR100 16 Apr 2020 NCBI FTP
Bombus impatiens GCF_000188095.3 BIMP_2.2 AR103 10 Apr 2020 NCBI FTP
Bombus pyrosoma GCF_014825855.1 ASM1482585v1 AR100 21 Sep 2021 NCBI FTP
Bombus terrestris GCF_910591885.1 iyBomTerr1.2 AR103 26 May 2022 NCBI FTP
Bombus vancouverensis nearcticus GCF_011952275.1 Bvanc_JDL1245 AR100 12 Apr 2020 NCBI FTP
Bombus vosnesenskii GCF_011952255.1 Bvos_JDL3184 5_v1.1 AR100 16 Apr 2020 NCBI FTP
Camponotus floridanus GCF_003227725.1 Cflo_v7.5 AR102 3 Jul 2018 NCBI FTP
Cephus cinctus GCF_000341935.1 Ccin1v2 AR101 16 May 2018 NCBI FTP
Ceratina calcarata GCF_001652005.1 ASM165200v1 AR101 17 Oct 2018 NCBI FTP
Ceratosolen solmsi marchali GCF_000503995.1 CerSol_1.0 AR100 9 Mar 2015 NCBI FTP
Chelonus insularis GCF_013357705.1 ASM1335770v1 AR100 23 Jun 2020 NCBI FTP
Colletes gigas GCF_013123115.1 ASM1312311v1 AR100 2 Sep 2021 NCBI FTP
Copidosoma floridanum GCF_000648655.2 Cflo_2.0 AR101 26 Dec 2017 NCBI FTP
Cotesia glomerata GCF_020080835.1 MPM_Cglom_v2.3 AR100 25 Oct 2021 NCBI FTP
Cyphomyrmex costatus GCF_001594065.1 Ccosl1.0 AR100 27 Sep 2016 NCBI FTP
Diachasma alloeum GCF_001412515.2 Dall2.0 AR101 23 May 2019 NCBI FTP
Dinoponera quadriceps GCF_001313825.1 ASM131382v1 AR100 12 Nov 2015 NCBI FTP
Diprion similis GCF_021155765.1 iyDipSimi1.1 AR100 23 Feb 2022 NCBI FTP
Drosophila melanogaster GCF_000001215.4 Release_6_plus_ISO1_MT 12 Feb 2020 NCBI FTP
Dufourea novaeangliae GCF_001272555.1 ASM127255v1 AR100 9 Feb 2016 NCBI FTP
Eufriesea mexicana GCF_001483705.1 ASM148370v1 AR100 26 Aug 2016 NCBI FTP
Fopius arisanus GCF_000806365.1 ASM80636v1 AR100 10 Feb 2015 NCBI FTP
Formica exsecta GCF_003651465.1 ASM365146v1 AR100 4 Jul 2019 NCBI FTP
Frieseomelitta varia GCF_011392965.1 Fvar_1.2 AR100 15 Sep 2021 NCBI FTP
Habropoda laboriosa GCF_001263275.1 ASM126327v1 AR100 26 Aug 2016 NCBI FTP
Harpegnathos saltator GCF_003227715.1 Hsal_v8.6 AR102 26 Jun 2018 NCBI FTP
Leptopilina heterotoma GCF_015476425.1 ASM1547642v1 AR100 10 Sep 2021 NCBI FTP
Linepithema humile GCF_000217595.1 Lhum_UMD_V04 AR100 27 Apr 2015 NCBI FTP
Megachile rotundata GCF_000220905.1 MROT_1.0 AR101 7 Apr 2015 NCBI FTP
Megalopta genalis GCF_011865705.1 USU_MGEN_1.2 AR100 17 Apr 2020 NCBI FTP
Microplitis demolitor GCF_000572035.2 Mdem2 AR101 19 Oct 2015 NCBI FTP
Monomorium pharaonis GCF_013373865.1 ASM1337386v2 AR102 30 Sep 2020 NCBI FTP
Nasonia vitripennis GCF_009193385.2 Nvit_psr_1.1 AR104 29 Feb 2020 NCBI FTP
Neodiprion fabricii GCF_021155785.1 iyNeoFabr1.1 AR100 8 Feb 2022 NCBI FTP
Neodiprion lecontei GCF_021901455.1 iyNeoLeco1.1 AR101 17 Feb 2022 NCBI FTP
Neodiprion pinetum GCF_021155775.1 iyNeoPine1.1 AR100 11 Feb 2022 NCBI FTP
Neodiprion virginianus GCF_021901495.1 iyNeoVirg1.1 AR100 17 Feb 2022 NCBI FTP
Nomia melanderi GCF_003710045.2 USU_Nmel_1.3 29 Jun 2022 NCBI FTP
Nylanderia fulva GCF_005281655.2 TAMU_Nfulva_1.1 2 May 2022 NCBI FTP
Odontomachus brunneus GCF_010583005.1 Obru_v1 AR100 14 Mar 2020 NCBI FTP
Ooceraea biroi GCF_003672135.1 Obir_v5.4 AR100 7 Nov 2018 NCBI FTP
Orussus abietinus GCF_000612105.2 Oabi_2.0 AR101 2 Jan 2018 NCBI FTP
Osmia bicornis bicornis GCF_907164935.1 iOsmBic2.1 AR101 1 Feb 2022 NCBI FTP
Osmia lignaria GCF_012274295.1 USDA_OLig_1.0 AR100 13 May 2020 NCBI FTP
Pogonomyrmex barbatus GCF_000187915.1 Pbar_UMD_V03 AR101 7 Jun 2018 NCBI FTP
Polistes canadensis GCF_001313835.1 ASM131383v1 AR100 24 Nov 2015 NCBI FTP
Polistes dominula GCF_001465965.1 Pdom_r1.2 AR100 6 Jan 2016 NCBI FTP
Polistes fuscatus GCF_010416935.1 CU_Pfus_HIC AR100 10 Sep 2021 NCBI FTP
Pseudomyrmex gracilis GCF_002006095.1 ASM200609v1 AR100 8 Mar 2017 NCBI FTP
Solenopsis invicta GCF_016802725.1 UNIL_Sinv_3.0 AR104 12 Feb 2021 NCBI FTP
Temnothorax curvispinosus GCF_003070985.1 ASM307098v1 AR100 7 May 2018 NCBI FTP
Trachymyrmex cornetzi GCF_001594075.2 Tcor1.1 20 May 2022 NCBI FTP
Trachymyrmex septentrionalis GCF_001594115.1 Tsep1.0 AR100 23 Sep 2016 NCBI FTP
Trachymyrmex zeteki GCF_001594055.1 Tzet1.0 AR100 22 Sep 2016 NCBI FTP
Trichogramma pretiosum GCF_000599845.2 Tpre_2.0 AR101 5 Jan 2018 NCBI FTP
Venturia canescens GCF_019457755.1 ASM1945775v1 AR100 3 Sep 2021 NCBI FTP
Vespa crabro GCF_910589235.1 iyVesCrab1.2 AR100 1 Mar 2022 NCBI FTP
Vespa mandarinia GCF_014083535.2 V.mandarinia_Nanaimo_p1.0 17 Apr 2021 NCBI FTP
Vespa velutina GCF_912470025.1 iVesVel2.1 AR100 6 Apr 2022 NCBI FTP
Vespula pensylvanica GCF_014466175.1 ASM1446617v1 AR100 22 Sep 2021 NCBI FTP
Vollenhovia emeryi GCF_000949405.1 V.emery_V1.0 AR100 30 Mar 2015 NCBI FTP
Wasmannia auropunctata GCF_000956235.1 wasmannia.A_1.0 AR100 24 Mar 2015 NCBI FTP
Ensembl Rapid Release Annotation Ancistrocerus nigricornis Ensembl Rapid Release GCA_916049575.1 geneset 2021_11 Cunningham et al. - PubMed 34791404 Ensembl FTP
Andrena dorsata Ensembl Rapid Release GCA_929108735.1 geneset 2022_03 Ensembl FTP
Andrena haemorrhoa Ensembl Rapid Release GCA_910592295.1 geneset 2021_11 Ensembl FTP
Anoplius nigerrimus Ensembl Rapid Release GCA_914767735.1 geneset 2022_02 Ensembl FTP
Aphidius gifuensis Ensembl Rapid Release GCA_014905175.1 geneset 2021_12 Ensembl FTP
Athalia rosae Ensembl Rapid Release GCA_917208135.1 geneset 2021_11 Ensembl FTP
Bombus bifarius Ensembl Rapid Release GCA_011952205.1 geneset 2021_11 Ensembl FTP
Bombus breviceps Ensembl Rapid Release GCA_014825925.1 geneset 2021_11 Ensembl FTP
Bombus campestris Ensembl Rapid Release GCA_905333015.2 geneset 2022_03 Ensembl FTP
Bombus confusus Ensembl Rapid Release GCA_014737475.1 geneset 2021_11 Ensembl FTP
Bombus consobrinus Ensembl Rapid Release GCA_014737455.1 geneset 2021_11 Ensembl FTP
Bombus cullumanus Ensembl Rapid Release GCA_014737535.1 geneset 2021_11 Ensembl FTP
Bombus difficillimus Ensembl Rapid Release GCA_014737525.1 geneset 2021_11 Ensembl FTP
Bombus haemorrhoidalis Ensembl Rapid Release GCA_014825975.1 geneset 2021_11 Ensembl FTP
Bombus hortorum Ensembl Rapid Release GCA_905332935.1 geneset 2021_11 Ensembl FTP
Bombus hypnorum Ensembl Rapid Release GCA_911387925.1 geneset 2021_11 Ensembl FTP
Bombus opulentus Ensembl Rapid Release GCA_014737405.1 geneset 2021_11 Ensembl FTP
Bombus pascuorum Ensembl Rapid Release GCA_905332965.1 geneset 2021_11 Ensembl FTP
Bombus picipes Ensembl Rapid Release GCA_014737485.1 geneset 2021_11 Ensembl FTP
Bombus polaris Ensembl Rapid Release GCA_014737335.1 geneset 2021_11 Ensembl FTP
Bombus pratorum Ensembl Rapid Release GCA_930367275.1 geneset 2022_03 Ensembl FTP
Bombus pyrosoma Ensembl Rapid Release GCA_014825855.1 geneset 2021_11 Ensembl FTP
Bombus sibiricus Ensembl Rapid Release GCA_014737505.1 geneset 2021_11 Ensembl FTP
Bombus skorikovi Ensembl Rapid Release GCA_014737355.1 geneset 2021_11 Ensembl FTP
Bombus soroeensis Ensembl Rapid Release GCA_014737365.1 geneset 2021_11 Ensembl FTP
Bombus superbus Ensembl Rapid Release GCA_014737385.1 geneset 2021_11 Ensembl FTP
Bombus sylvestris Ensembl Rapid Release GCA_911622165.1 geneset 2021_11 Ensembl FTP
Bombus terrestris Ensembl Rapid Release GCA_910591885.2 geneset 2022_03 Ensembl FTP
Bombus turneri Ensembl Rapid Release GCA_014825825.1 geneset 2021_11 Ensembl FTP
Bombus vancouverensis nearcticus Ensembl Rapid Release GCA_011952275.1 geneset 2021_11 Ensembl FTP
Bombus waltoni Ensembl Rapid Release GCA_014737395.1 geneset 2021_11 Ensembl FTP
Cerceris rybyensis Ensembl Rapid Release GCA_910591515.1 geneset 2021_11 Ensembl FTP
Colletes gigas Ensembl Rapid Release GCA_013123115.1 geneset 2021_11 Ensembl FTP
Dolichovespula media Ensembl Rapid Release GCA_911387685.1 geneset 2021_11 Ensembl FTP
Dolichovespula saxonica Ensembl Rapid Release GCA_911387935.1 geneset 2022_02 Ensembl FTP
Ectemnius continuus Ensembl Rapid Release GCA_910591665.1 geneset 2021_11 Ensembl FTP
Ectemnius lituratus Ensembl Rapid Release GCA_910593735.2 geneset 2022_03 Ensembl FTP
Ichneumon xanthorius Ensembl Rapid Release GCA_917499995.1 geneset 2021_11 Ensembl FTP
Lasioglossum lativentre Ensembl Rapid Release GCA_916610255.1 geneset 2022_02 Ensembl FTP
Lasioglossum morio Ensembl Rapid Release GCA_916610235.2 geneset 2022_03 Ensembl FTP
Macropis europaea Ensembl Rapid Release GCA_916610135.1 geneset 2021_11 Ensembl FTP
Nomada fabriciana Ensembl Rapid Release GCA_907165295.1 geneset 2021_11 Ensembl FTP
Nysson spinosus Ensembl Rapid Release GCA_910591585.1 geneset 2021_11 Ensembl FTP
Osmia bicornis bicornis Ensembl Rapid Release GCA_907164935.1 geneset 2021_11 Ensembl FTP
Seladonia tumulorum Ensembl Rapid Release GCA_913789895.3 geneset 2022_03 Ensembl FTP
Sphecodes monilicornis Ensembl Rapid Release GCA_913789915.3 geneset 2022_03 Ensembl FTP
Vespa crabro Ensembl Rapid Release GCA_910589235.2 geneset 2022_03 Ensembl FTP
Vespa velutina Ensembl Rapid Release GCA_912470025.1 geneset 2021_11 Ensembl FTP
Vespula germanica Ensembl Rapid Release GCA_905340365.1 geneset 2021_11 Ensembl FTP
Vespula vulgaris Ensembl Rapid Release GCA_905475345.1 geneset 2021_11 Ensembl FTP
GenBank Melipona quadrifasciata GCA_001276565.1_ASM127656v1 10 Sep 2015 Sayers et al. - PubMed 30365038 NCBI FTP
Consortium Official Gene Set Acromyrmex echinatior aech_OGSv3.8 Nygaard et al. - PubMed 21719571 HGD OGS GFF3 Download
Apis mellifera amel_OGSv3.2 Elsik et al. - PubMed 24479613
Atta cephalotes acep_OGSv1.2 Suen et al. - PubMed 21347285
Bombus impatiens bimp_OGSv1.0 Sadd et al. - PubMed 25908251
Camponotus floridanus cflo_OGSv3.3 Bonasio et al. - PubMed 20798317
Cardiocondyla obscurior cobs_OGSv1.4 Schrader et al. - PubMed 25510865
Dufourea novaeangliae Dufourea_novaeangliae_v1.1 Kapheim et al. - PubMed 25977371
Eufriesea mexicana Eufriesea_mexicana_v1.1 Kapheim et al. - PubMed 25977371
Habropoda laboriosa Habropoda_laboriosa_v1.2 Kapheim et al. - PubMed 25977371
Harpegnathos saltator hsal_OGSv3.3 Bonasio et al. - PubMed 20798317
Lasioglossum albipes lalb_OGSv5.42 Kocher et al. - PubMed 24359881
Linepithema humile lhum_OGSv1.2 Smith et al. - PubMed 21282631
Megachile rotundata Megachile_rotundata_v1.1 Kapheim et al. - PubMed 25977371
Melipona quadrifasciata Melipona_quadrifasciata_v1.1 Kapheim et al. - PubMed 25977371
Nasonia vitripennis nvit_OGSv1.2 Werren JH et al. - PubMed 20075255
Nvit_EviGene Werren JH et al. - PubMed 20075255
Ooceraea biroi armyant.OGS.V1.8.6 Oxley PR et al. - PubMed 24508170
Pogonomyrmex barbatus pbar_OGSv1.2 Smith et al. - PubMed 21282651
Solenopsis invicta sinv_OGSv2.2.3 Wurm et al. - PubMed 21282665

Homology

Orthologue Relationships from HGD-Ortho All species HGD-Ortho from HGD; 12 Oct 2022 Walsh el al. - PubMed 34747465 HGD Ortholog Download
Reciprocal Best Hits to Drosophila melanogaster Drosophila-RBH from HGD; 12 Oct 2022 Walsh el al. - PubMed 34747465
Orthologue Relationships from OrthoDB Acromyrmex echinatior
Apis mellifera
Athalia rosae
Atta colombica
Bombus impatiens
Camponotus floridanus
Cardiocondyla obscurior
Cephus cinctus
Ceratina calcarata
Ceratosolen solmsi marchali
Copidosoma floridanum
Cyphomyrmex costatus
Diachasma alloeum
Dinoponera quadriceps
Drosophila melanogaster
Dufourea novaeangliae
Eufriesea mexicana
Fopius arisanus
Habropoda laboriosa
Harpegnathos saltator
Lasioglossum albipes
Linepithema humile
Megachile rotundata
Melipona quadrifasciata
Microplitis demolitor
Monomorium pharaonis
Nasonia vitripennis
Neodiprion lecontei
Orussus abietinus
Pogonomyrmex barbatus
Polistes canadensis
Pseudomyrmex gracilis
Solenopsis invicta
Trachymyrmex septentrionalis
Trichogramma pretiosum
Vollenhovia emeryi
Wasmannia auropunctata
OrthoDB release v11; October 2022 Zdobnov et al. - PubMed 33196836 OrthoDB

Proteins

Protein Annotations from UniProt (numbers of proteins are shown in parentheses) Acromyrmex echinatior (13972)
Ancistrocerus nigricornis (2)
Andrena dorsata (35)
Andrena haemorrhoa (39)
Anoplius nigerrimus (29)
Aphidius gifuensis (11629)
Apis cerana (5827)
Apis dorsata (276)
Apis florea (168)
Apis laboriosa (46)
Apis mellifera (20904)
Athalia rosae (40)
Atta cephalotes (10689)
Atta colombica (14195)
Bombus bifarius (19394)
Bombus breviceps (24)
Bombus campestris (24)
Bombus confusus (9)
Bombus consobrinus (32)
Bombus cullumanus (3)
Bombus difficillimus (9)
Bombus haemorrhoidalis (13)
Bombus hortorum (56)
Bombus hypnorum (23)
Bombus impatiens (19234)
Bombus opulentus (6)
Bombus pascuorum (117)
Bombus picipes (8)
Bombus polaris (20)
Bombus pratorum (50)
Bombus pyrosoma (20)
Bombus sibiricus (19)
Bombus skorikovi (5)
Bombus soroeensis (13)
Bombus superbus (2)
Bombus sylvestris (33)
Bombus terrestris (17507)
Bombus turneri (5)
Bombus vancouverensis nearcticus (7)
Bombus vosnesenskii (19385)
Bombus waltoni (22)
Camponotus floridanus (14806)
Cephus cinctus (310)
Ceratina calcarata (34)
Ceratosolen solmsi marchali (8)
Cerceris rybyensis (12)
Chelonus insularis (21)
Colletes gigas (20)
Copidosoma floridanum (169)
Cotesia glomerata (26)
Cyphomyrmex costatus (15724)
Diachasma alloeum (443)
Dinoponera quadriceps (17674)
Diprion similis (22)
Dolichovespula media (10)
Dolichovespula saxonica (12)
Drosophila melanogaster (42761)
Dufourea novaeangliae (11369)
Ectemnius continuus (17)
Ectemnius lituratus (4)
Eufriesea mexicana (7071)
Fopius arisanus (13360)
Formica exsecta (14)
Frieseomelitta varia (11118)
Habropoda laboriosa (12787)
Harpegnathos saltator (15052)
Lasioglossum albipes (23)
Lasioglossum lativentre (26)
Lasioglossum morio (111)
Leptopilina heterotoma (21)
Linepithema humile (94)
Macropis europaea (20)
Megachile rotundata (47)
Megalopta genalis (11)
Melipona quadrifasciata (14288)
Microplitis demolitor (15)
Monomorium pharaonis (36)
Nasonia vitripennis (25102)
Neodiprion lecontei (14473)
Neodiprion pinetum (10)
Nomada fabriciana (22)
Nylanderia fulva (447)
Nysson spinosus (5)
Odontomachus brunneus (8)
Ooceraea biroi (25795)
Orussus abietinus (14)
Osmia bicornis bicornis (5)
Osmia lignaria (32)
Pogonomyrmex barbatus (16255)
Polistes canadensis (10)
Polistes dominula (80)
Polistes fuscatus (62)
Pseudomyrmex gracilis (24)
Seladonia tumulorum (49)
Solenopsis invicta (14410)
Sphecodes monilicornis (32)
Temnothorax curvispinosus (21945)
Trachymyrmex cornetzi (18757)
Trachymyrmex septentrionalis (15227)
Trachymyrmex zeteki (14333)
Trichogramma pretiosum (12)
Venturia canescens (83)
Vespa crabro (36)
Vespa mandarinia (56)
Vespa velutina (41)
Vespula germanica (17251)
Vespula pensylvanica (18575)
Vespula vulgaris (15565)
Vollenhovia emeryi (126)
Wasmannia auropunctata (136)
UniProt Release 2022_03; 3 Aug 2022 UniProt Consortium - PubMed 33237286 UniProt FTP
Protein family and domain assignments to proteins from InterPro See UniProt Protein List InterPro Release 90.0; 4 Aug 2022 Blum et al. - PubMed 33156333 InterPro FTP

Gene Ontology

Gene Ontology Annotations from UniProt See UniProt Protein List UniProt Release 2022_03; 3 Aug 2022 UniProt Consortium - PubMed 33237286 UniProt FTP
Gene Ontology Annotations from HGD-GO-Annotation All species HGD-GO-Annotation from HGD; 26 Oct 2022 Walsh el al. - PubMed 34747465 HGD GO Annotation Download
Gene Ontology Annotations from FlyBase Drosophila melanogaster FlyBase release FB2022_05; 13 Sep 2022 Larkin et al. - PubMed 33219682 FlyBase Download

Pathways

Pathway Information from KEGG Acromyrmex echinatior
Aphidius gifuensis
Apis laboriosa
Apis mellifera
Atta cephalotes
Bombus bifarius
Bombus impatiens
Bombus pyrosoma
Bombus terrestris
Bombus vancouverensis nearcticus
Bombus vosnesenskii
Camponotus floridanus
Cephus cinctus
Ceratina calcarata
Ceratosolen solmsi marchali
Colletes gigas
Cotesia glomerata
Diachasma alloeum
Dinoponera quadriceps
Drosophila melanogaster
Fopius arisanus
Formica exsecta
Harpegnathos saltator
Leptopilina heterotoma
Linepithema humile
Megalopta genalis
Microplitis demolitor
Monomorium pharaonis
Nasonia vitripennis
Nomia melanderi
Ooceraea biroi
Osmia bicornis bicornis
Pogonomyrmex barbatus
Polistes canadensis
Polistes fuscatus
Pseudomyrmex gracilis
Solenopsis invicta
Trichogramma pretiosum
Vespula pensylvanica
Vollenhovia emeryi
KEGG release 104.0; 1 Oct 2022 Kanehisa et al. - PubMed 33125081 KEGG Download
Pathway information inferred through orthologues from curated human pathways Drosophila melanogaster Reactome version 80; 5 Apr 2022 Gillespie et al. PubMed 34788843 Reactome Download

Interactions

Interactions from BioGRID Apis mellifera BioGRID version 4.4.213; 25 Aug 2022 Oughtred et al. - PubMed: 33070389 BioGRID Download
Drosophila melanogaster
Interactions from IntAct Drosophila melanogaster IntAct Release 243; 13 Jul 2022 Del Toro et al. - PubMed 34761267 IntAct Download

Publications

A mapping from genes to publications from NCBI See NCBI RefSeq Gene list NCBI PubMed Sayers et al. - PubMed 33095870 NCBI FTP
A mapping from genes to publications from UniProt See UniProt Protein List UniProt Release 2022_03; 3 Aug 2022 UniProt Consortium - PubMed 33237286 UniProt FTP

Ontologies

Evidence Ontology Release date: 5 Aug 2022 Nadendla et al. - PubMed 34986598 ECO
Gene Ontology Release date: 4 Dec 2022 Gene Ontology Consortium - PubMed 33290552 GO
Hymenoptera Anatomy Ontology Release date: 5 Mar 2021 Yoder et al. - PubMed 21209921 HAO
PSI MI Ontology Release date: 15 Apr 2021 Orchard et al. - PubMed 20013380 PSI-MI
Sequence Ontology Release date: 22 Nov 2021 Eilbeck et al. - PubMed: 15892872 SO