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Protein Alignments

Alignments of protein sets from all available species of Hymenoptera versus the Pogonomyrmex barbatus Assembly v2.0 are listed below. Results are available in .gff3 format, and available for download as compressed (.gz) files:

acep = Atta cephalotes; aech = Acromyrmex echinatior; amel = Apis mellifera; cflo = Camponotus floridanus; dmel = Drosophila melanogaster*; hsal = Harpegnathos saltator; lhum = Linepithema humile; metazoa_swissprot = collection of all metazoans from SwissProt; nvit = Nasonia vitripennis; pogo = Pogonomyrmex barbatus; sinv = Solenopsis invicta; znev = Zootermopsis nevadensis*.

* = outgroup to the Hymenoptera.

acep_OGSv1.2_pep_v_Pbar_1.0_scaffolds_exonerate_60id_60aln_match.gff3.gz

aech_OGSv3.8_pep_v_Pbar_1.0_scaffolds_exonerate_60id_60aln_match.gff3.gz

amel_OGSv1.0_pep_v_Pbar_1.0_scaffolds_exonerate_60id_60aln_match.gff3.gz

amel_OGSv3.1_pep_v_Pbar_1.0_scaffolds_exonerate_60id_60aln_match.gff3.gz

cflo_OGSv3.3_pep_v_Pbar_1.0_scaffolds_exonerate_60id_60aln_match.gff3.gz

dmel_r5.42_pep_v_Pbar_1.0_scaffolds_exonerate_60id_60aln_match.gff3.gz

hsal_OGSv3.3_pep_v_Pbar_1.0_scaffolds_exonerate_60id_60aln_match.gff3.gz

lhum_OGSv1.2_pep_v_Pbar_1.0_scaffolds_exonerate_60id_60aln_match.gff3.gz

metazoa_swissprot_v_Pbar_1.0_scaffolds_exonerate_60id_60aln_match.gff3.gz

Nvit_2.0_refseq_pep_v_Pbar_1.0_scaffolds_exonerate_60id_60aln_match.gff3.gz

nvit_OGSv1.2_pep_v_Pbar_1.0_scaffolds_exonerate_60id_60aln_match.gff3.gz

nvit_OGSv2.0_pep_v_Pbar_1.0_scaffolds_exonerate_60id_60aln_match.gff3.gz

sinv_OGSv2.2.3_pep_v_Pbar_1.0_scaffolds_exonerate_60id_60aln_match.gff3.gz